+1, why in the world would you want to use a worse PCM? the 98 GMT400's also has several components that the 96-97 didn't so you'll lose functionalitly, things like gas tank pressure sensor, EVAP vent valve control, fuel tank level (96-97 went straight to the gauge, 98+ go through the PCM first, a '97 PCM will not have any funtionality for this), and likely a few other things, I'm guessing you're talking about your '97 and '00 in your sig? if so you'll have lots of problems and extra cost since the '97 is a manual trans, and the '00 is a 4L80e.
not to mention MUCH less support from tuning software. you'd need a tune on the 97 PCM for it to work anyways. if you're going to swap PCMs go with one that is better, faster, and has more support like the 411.
the 411 will work with you '00 and it's stock harness (you're '97 can be upgraded to the 411 too), if you're not familiar with the swap here's my writeup on it:
http://www.gmtruckcentral.com/articles/12200411.html